CCGWAS
Overview
| Field |
Value |
| Separator |
TAB |
| ## Column mapping |
|
| Raw header |
Canonical |
A1 |
EA |
A2 |
NEA |
BP |
POS |
CCGWAS_signif |
— |
CHR |
CHR |
Exact_beta |
— |
Exact_pval |
— |
Exact_se |
— |
OLS_beta |
BETA |
OLS_pval |
P |
OLS_se |
SE |
SNP |
SNPID |
| ## Coverage |
|
6/9 tier groups satisfied.
| Tier |
Status |
Matched |
Missing |
| Variant ID |
yes |
SNPID |
rsID |
| Genomic location |
yes |
CHR, POS |
— |
| Effect / other allele |
yes |
EA, NEA |
— |
| Effect size |
yes |
BETA |
OR, HR, Z |
| Uncertainty |
yes |
SE |
— |
| P-value |
yes |
P |
MLOG10P |
| Sample size |
no |
— |
N, N_CASE |
| Allele frequency |
no |
— |
EAF, MAF, NEAF |
| Imputation / QC |
no |
— |
INFO |
| ## See also |
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