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Regularization

Definition
AI-generated

Regularization constrains a model to improve generalization and calibration: L1/L2 penalties shrink coefficients in classical prediction, while dropout, noise injection, weight decay, and early stopping play analogous roles in deep learning on high-dimensional omics inputs.

Why it matters in GWAS

Statistical concepts underpin GWAS significance, effect estimation, relatedness random effects, multiple testing, fine-mapping priors, and post-GWAS multivariate methods; neural predictors of molecular endpoints also need regularization choices reported alongside architecture.

Example usage

"We compared ridge versus lasso SNP polygenic predictors to see which regularization better matched the cross-ancestry validation slope."

References

  • Casella G, Berger RL. (2002). Statistical Inference. Duxbury Press.
  • Wasserman L. (2004). All of Statistics. Springer.
  • Goodfellow I, Bengio Y, Courville A. (2016). Deep Learning. MIT Press.

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