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Firth Regression

Definition
AI-generated

Firth's penalized logistic regression adds a small bias-correction term to the log-likelihood to reduce separation bias when data are sparse, unbalanced, or nearly separable—common for rare variants or skewed case-control ratios.

Topics

Why it matters in GWAS

Standard logistic ML estimates can be infinite or unstable at low counts; Firth regression (e.g. in REGENIE, PENGLR) stabilizes single-variant tests in those regimes.

Example usage

"The primary methods include Firth Regression as part of the association and model-comparison workflow."

References

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