Firth Regression¶
Definition
AI-generated
Firth's penalized logistic regression adds a small bias-correction term to the log-likelihood to reduce separation bias when data are sparse, unbalanced, or nearly separable—common for rare variants or skewed case-control ratios.
Topics
Why it matters in GWAS¶
Standard logistic ML estimates can be infinite or unstable at low counts; Firth regression (e.g. in REGENIE, PENGLR) stabilizes single-variant tests in those regimes.
Example usage¶
"The primary methods include Firth Regression as part of the association and model-comparison workflow."
Related terms¶
References¶
- Firth D. (1993). Bias reduction of maximum likelihood estimates. Biometrika.
- GWASTutorial: Rare variant association tests.
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