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uv

Definition
AI-generated

uv is a fast Python package and project manager from Astral—think pip/virtualenv/pip-tools-style workflows with aggressive performance and lockfile-friendly installs; it is increasingly offered alongside conda for reproducible scientific stacks where a pure-Python toolchain suffices.

Topics

Why it matters in GWAS

New tooling repos may ship pyproject.toml plus uv lockfiles instead of only conda YAML; methods readers should recognize install instructions and CI snippets that pin versions via uv for bit-for-bit notebook or script reruns.

Example usage

"The benchmark harness README uses uv sync to recreate the exact dependency tree before running association timings."

References

  • Astral. uv documentation. https://docs.astral.sh/uv/

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