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Karyotype

Definition
AI-generated

A karyotype is the visual or systematic description of an individual’s chromosomes—number, size, banding pattern, and large structural rearrangements—usually from metaphase spreads or genome-wide copy-number inference.

Topics

Why it matters in GWAS

Large cytogenetic abnormalities are typically excluded or analyzed separately in SNP GWAS; CNV and aneuploidy calls from arrays or sequencing intersect conceptually with karyotype-level pathology.

Example usage

"Array-based CNV calling flagged a duplication consistent with an abnormal karyotype referred for cytogenetics."

References

  • McGowan-Jordan J, et al. (2020). ISCN 2020: An International System for Human Cytogenomic Nomenclature. Karger.

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