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The final presentation for 基礎演習II

Note

  • Time limit: ~15 mins
  • Number of slides: less than 10 slides

Outline

(Just an example, there is no need to strictly follow this.)

  • Describe the general workflow of GWAS in 1 slide. (1 min)
  • Summarize QC steps in 1 slide (1 min)
  • Summarize PCA in 1 slide (1 min)
    • explain the aims and major steps
  • Show your 1000 genome PCA results (~2 slides): (~4 min)
    • explain what tool and data you use.
    • explain what kind of analysis you performed.
    • show your results and explain the scatter plot.
  • Association analysis (1-2 slides) : (2 min)
    • explain the variables in the regression and the header of your GWAS results.
    • explain your manhattan plot and qq plot.
  • Post GWAS analysis (~6 min)
    • explain what kind of post-GWAS analysis you perform.
    • explain the aim for each post-GWAS analysis.
    • explain the results of LDSC.
    • explain the annotated results